Insertion junction: CLIP2.058665_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058665
Chromosome:chromosome 6
Location:6390482
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g293362 (1 of 726) IPR011009 - Protein kinase-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCGGGCTGTTGAAGGCCGCGTGCCGCCGCTTGCTACAGCAGCCCGCTG
Internal bar code:AGGAGAAACCTCCAGCAGAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:442
LEAP-Seq percent confirming:38.8889
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGAAGCACGACGTACGC
Suggested primer 2:GGTCAAGTTGGAGGTGCGTA