Insertion junction: CLIP2.058667_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.058667
Chromosome:chromosome 14
Location:709088
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g801603 (1 of 71) PF12499 - Pherophorin (DUF3707) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGGAGGCATGCCTCCCATCCATGCAACACACACATACACATACACACA
Internal bar code:TTATCAGTCTTTAGTGTATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:181
LEAP-Seq percent confirming:3.57143
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGGCAACCAGGATTAGTG
Suggested primer 2:GGCATGACACACACACACAC