Insertion junction: CLIP2.058668_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058668
Chromosome:chromosome 2
Location:5613401
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800239 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAGGAAGACAAGCTCCTTGCCGCGTCTCCCTTGGGCGCGGCGCCGGGC
Internal bar code:ATTACTAAGTGAGGTTAGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3343
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTTTTCGTTCTGTGCCG
Suggested primer 2:TGCCCTCAGAAGGTCGGATA