Insertion junction: CLIP2.058678_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058678
Chromosome:chromosome 8
Location:1896777
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g367650 MUT11 (1 of 1) K14963 - COMPASS component SWD3 (WDR5, SWD3, CPS30); Transcriptional repression protein 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGAAACGCCCCCCGGCGTGTGGCTGGCCGCTTCACATAAGGCCGCGCG
Internal bar code:ACATGGGCTAGGAACATCCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:797
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGTTACTTCGGCTCGCG
Suggested primer 2:CTCTGGTGAGGACTAGGGCT