Insertion junction: CLIP2.058685_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058685
Chromosome:chromosome 6
Location:578790
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g253250 MADS2 (1 of 1) PTHR11945:SF221 - SERUM RESPONSE FACTOR 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGGTTCCCCTCGCAAGGGAAAAGTGGGCTGAGCCCACGCCACGTCTT
Internal bar code:TCTTAGGGGTACTGTCACTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:763
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGCCATATCTGGGGACT
Suggested primer 2:CACATACCACCCCTCTGCTG