Insertion junction: CLIP2.058694_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058694
Chromosome:chromosome 4
Location:1295753
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214690 (1 of 1) PTHR22731:SF3 - RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGGCGCCCTCGCGCCAGCTGCGGTGTGCCAGCGTGTGAGTGTACATCA
Internal bar code:GGTGTCGACCTACTATGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:566
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAGGACCAGGAACGAGT
Suggested primer 2:TGTCTGACATGACGTCTGCC