Insertion junction: CLIP2.058698_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058698
Chromosome:chromosome 3
Location:6721497
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196000 (1 of 1) PF05625 - PAXNEB protein (PAXNEB) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGTTGAGTTTCTCCATGTCACCAACTCTTTCGCCAGTTCTATAGAGCA
Internal bar code:GGTTGACTCTGATCATCCCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4515
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCAGCTTCCCTTGAGTC
Suggested primer 2:GGACATGTTGATGGGGCTGA