Insertion junction: CLIP2.058724_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058724
Chromosome:chromosome 5
Location:3386544
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre05.g232900 (1 of 4) PF02181 - Formin Homology 2 Domain (FH2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGATGAGGGGGGAGAGAGGGAGGAGAGGATTAGGGCATCCACGCAAGGC
Internal bar code:GGTGGTGAGATGTGTATAGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:293
LEAP-Seq percent confirming:67.8571
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTGATCACCTCCAACCGC
Suggested primer 2:AACCCCTATCCTCCACCTCC