Insertion junction: CLIP2.058726_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058726
Chromosome:chromosome 16
Location:5571206
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g681600 CSV14 Chlamydomonas-specific family protein 3'UTR
Cre16.g681700 NUOS4B (1 of 2) K03937 - NADH dehydrogenase (ubiquinone) Fe-S protein 4 (NDUFS4); NADH:ubiquinone oxidoreductase subunit 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGTCAGTACTGACGCCGTCGTCCCTGGCTACGCTCTATCTTTGCGTGG
Internal bar code:GGGGGGTGGAAAGAAATTTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5119
LEAP-Seq percent confirming:47.619
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:CACTTGAACCACGCCCAAAG
Suggested primer 2:CGGCGCTAGGATCCAGAAAT