Insertion junction: CLIP2.058729_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.058729
Chromosome:chromosome 1
Location:7049652
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g050451 TTL6 (1 of 1) 1.2.1.24//6.3.2.25 - Succinate-semialdehyde dehydrogenase (NAD(+)) // Tubulin--tyrosine ligase / TTL; predicted tubulin tyrosine ligase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGGCGGGCAGCAACATGAAGAAAGGGGGCTATGTAGCCGTGCCGTTC
Internal bar code:AGCAAAGGTTGTTCTAAATACA

Confirmation - LEAP-Seq

LEAP-Seq distance:153
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTACTGACGATCCACTC
Suggested primer 2:ACAGGTCCCACATGTCGTTC