Insertion junction: CLIP2.058737_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058737
Chromosome:chromosome 3
Location:6808412
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197200 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGGCAAATCACACGAGCACCGAGTCAGCAGAACATGTCTACACTTCA
Internal bar code:CTCTCTACACTTTTATGATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1127
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTTGAAGATGTCGGGTC
Suggested primer 2:CAATGAGAGGCTCCCAGCAA