Insertion junction: CLIP2.058738_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.058738
Chromosome:chromosome 8
Location:3105468
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g375800 3'UTR
Cre08.g375801 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAATCGAACTTTCCATCGCCGGAGCTCGCTAAGGACTGAACAGGCTCC
Internal bar code:ATTATGGGATAATAGTTAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1173
LEAP-Seq percent confirming:48.8889
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGGAAGCGCTCAAAGTG
Suggested primer 2:GAGGTGGCTGAGCTGAAGAG