Insertion junction: CLIP2.058744_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058744
Chromosome:chromosome 6
Location:6747751
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g295600 RME1 RNA methylase; (1 of 1) PTHR12829//PTHR12829:SF2 - N6-ADENOSINE-METHYLTRANSFERASE // N6-ADENOSINE-METHYLTRANSFERASE 70 KDA SUBUNIT 3'UTR
Cre06.g295650 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATACAGTCGAGCGTTTGACGAGCCAACCGCTACCTGGAAAAGGCTTGC
Internal bar code:ATCTTCAGTTAGAGCAGTTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3108
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGCGAGGATAGGAGAAC
Suggested primer 2:CGACGAGATGTACTCCCTGC