Insertion junction: CLIP2.058757_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058757
Chromosome:chromosome 12
Location:9089660
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g544401 (1 of 1) PTHR20934:SF0 - TRANSCRIPTION ELONGATION FACTOR 1 HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAATTGGGTCGGTACAATCACACACTAGCGAATGAGGCTTGGAGACGT
Internal bar code:ACCTTAAATTAAGTCGTGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:335
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACCTCCATCTCATCCGC
Suggested primer 2:GAGGACAGTTCTGGAAGGCC