Insertion junction: CLIP2.058760_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058760
Chromosome:chromosome 1
Location:4025465
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g026500 ASP3 (1 of 2) 3.4.23.12 - Nepenthesin / Nepenthes aspartic proteinase; Pepsin-type aspartyl protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCTGCCCCCTCACCTGGCCTGGTTGAGCTCCTTAGTAAGTGCCGGCG
Internal bar code:GTGGTGAGTGGGCATGTTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:943
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGACTTGTGGGCCTTTGC
Suggested primer 2:CTTCCCTCCACTGCGGAAAT