Insertion junction: CLIP2.058788_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058788
Chromosome:chromosome 4
Location:2068394
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g219500 DNJ30 (1 of 1) PTHR22904:SF338 - LD24721P; DnaJ-like protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTGTAAAACGGTGCGAGGTCAGGAAAGTGGGGGATTGAGTTCTGTGTC
Internal bar code:TTTAAAATTTAATGGTCGAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2286
LEAP-Seq percent confirming:98.9474
LEAP-Seq n confirming:94
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTGGTAGGCCAGCTGGTC
Suggested primer 2:ATGAATCCGGACCCAGCAAG