Insertion junction: CLIP2.058789_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058789
Chromosome:chromosome 2
Location:8136683
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g144000 IND1 (1 of 1) PTHR10584//PTHR10584:SF201 - SUGAR KINASE // INDIGOIDINE SYNTHASE A-LIKE PROTEIN; Indigoidine synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCGCCACGCACGCCACAAATCCCTCGCAGCCAAGGCTACTCACACCGC
Internal bar code:ATGAGGCAGAGAAGAGTCCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:505
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGTGGTTCAGAGAAGGG
Suggested primer 2:TAGTTTCGGAGTTGGACGGC