Insertion junction: CLIP2.058798_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058798
Chromosome:chromosome 6
Location:3150312
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275850 HTA6,HTA3 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCACTGGCGCTGTCACCAAACCCGTTCCCAAACCCAATGACTCCTCG
Internal bar code:TTTACGAGGACTCAATGTCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1648
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGGTTGTTTGACCCAAC
Suggested primer 2:GAAGTTGGACAAAACCCGCC