Insertion junction: CLIP2.058802_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058802
Chromosome:chromosome 14
Location:3120141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g628533 CYG3 (1 of 70) 4.6.1.2 - Guanylate cyclase / Guanylyl cyclase; Adenylate/guanylate cyclase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCTTGAGGAGACGGCCGACCCCCACACGGACAAAACCGTGTTGTTTA
Internal bar code:CCGACAAGACGTATGGCGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1179
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGAAGTTCTGGGCCGTCA
Suggested primer 2:TTGGGCCTTTGTGGTTCCTT