Insertion junction: CLIP2.058811_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058811
Chromosome:chromosome 4
Location:2333348
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g220900 GT90-4,GT90F4 (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90); GT90 family protein 4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGACATGAGAGCGAACGAGCCGTTTTCATAGGGTTAATTTCAGGCGGAG
Internal bar code:AATTTGGTTTAACGTGTAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1059
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGCTTGGTTGCCCATGTA
Suggested primer 2:CCCGTGAAGTGAGACAGGAC