Insertion junction: CLIP2.058814_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.058814
Chromosome:chromosome 13
Location:1606114
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g573400 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTTCCTTTCCCGAGCCGACCGGCATTTGACTTGCATGGCCGTCGCCT
Internal bar code:TGTGTAACAGCTCAACCTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1602
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCAGCATCCTTCTTGTCT
Suggested primer 2:CGCACAAAGACACCCACTTG