Insertion junction: CLIP2.058815_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058815
Chromosome:chromosome 3
Location:2893983
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162601 PGP3 (1 of 2) 2.7.8.5 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase / Phosphatidylglycerophosphate synthase; Phosphatidylglycerophosphate synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAGAATGCTGAAGCGGACCGTGGAGTGGTGGATGAGTGCTATGGGCC
Internal bar code:AAGTCGGTACACCTGCGCCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:685
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGAGAGGTGACAGGTGG
Suggested primer 2:CCGAGGGCAAAGCGTACTAT