Insertion junction: CLIP2.058834_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058834
Chromosome:chromosome 9
Location:5885106
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411950 (1 of 3) IPR001005//IPR009057//IPR017877//IPR017930 - SANT/Myb domain // Homeodomain-like // Myb-like domain // Myb domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACGGATGTAAAGCCGCAGCATTCGCTCAACTCTGCAGCCATCCCGGTG
Internal bar code:AGTTAACCTTAGGAAGATTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2666
LEAP-Seq percent confirming:98.0263
LEAP-Seq n confirming:149
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:152

Suggested primers for confirmation by PCR

Suggested primer 1:CACACCCGCGACATCGTATA
Suggested primer 2:CGTCAATGGTGTGGTGCTTG