Insertion junction: CLIP2.058835_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058835
Chromosome:chromosome 7
Location:4405533
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343101 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTCCGCACAATACCCAGACGTCAAATTCTTTGGTGGGTCTCTTTGGGG
Internal bar code:TAAACTTTGGGCCATGTCCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1932
LEAP-Seq percent confirming:67.2727
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCGGGAGCCATTGTTTCT
Suggested primer 2:CTGCTGCCGCCATTTCTTTT