Insertion junction: CLIP2.058838_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058838
Chromosome:chromosome 2
Location:6634641
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389850 (1 of 29) IPR013320 - Concanavalin A-like lectin/glucanase domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAATCGGCGCAGCGCTGTGCGTCTTTGTTAAGACACACGCATGGTCGGT
Internal bar code:GAGTTAACGAGACCGGCGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:844
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGTCAGAAAACCCACAC
Suggested primer 2:CGAGTAGTAACGGACCGACG