Insertion junction: CLIP2.058847_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.058847
Chromosome:chromosome 16
Location:6633255
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673700 (1 of 1) K14799 - pre-rRNA-processing protein TSR1 (TSR1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTAATCGTGCGGCTCTGGTGGCATGCTACGTGCCTGCGTCCCCCGCGG
Internal bar code:CAGCGTCGATATAGGGATGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1591
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGTGTCTTGCCCGTCTTT
Suggested primer 2:ATCCTCTGCTGCACTTGTCC