Insertion junction: CLIP2.058848_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058848
Chromosome:chromosome 3
Location:3864598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170400 (1 of 1) PF12579 - Protein of unknown function (DUF3755) (DUF3755) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCATACCCCGTTACCAAACCCACTGAGAAGGCATCGCAGGACAAACCG
Internal bar code:GCACAGTGAATAGGTACTGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1767
LEAP-Seq percent confirming:95.1219
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGTTCCTTCATGCGTCA
Suggested primer 2:ATAGACGCAGCTGTAGACGC