Insertion junction: CLIP2.058858_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058858
Chromosome:chromosome 1
Location:3659095
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023750 CDS
Cre01.g023773 (1 of 6) IPR000253//IPR008984 - Forkhead-associated (FHA) domain // SMAD/FHA domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCTAGAGAGGCTCATCTCGTCTCTCAACCAGGCGAGTTGACGAGGCAT
Internal bar code:ACGCTTCTCACCTTCCGTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1747
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AAGACTGATGGGCATTGGGG
Suggested primer 2:TTATCCGCACGTCGCTACTC