Insertion junction: CLIP2.058866_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.058866
Chromosome:chromosome 17
Location:3152474
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720750 TRF4 (1 of 3) K03514 - non-canonical poly(A) RNA polymerase PAPD5/7 (PAPD5_7, TRF4); Class-II RNA nucleotidyl transferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGGCTATGTTTTTAGTTGTCACATAACCCAAGCATAAATCACCTCCAA
Internal bar code:TTCAGTAGCCTTTTAAGTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1417
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAGAGCTTGCACTGCAG
Suggested primer 2:CGTCCGAGTCCGACAATAGG