Insertion junction: CLIP2.058869_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058869
Chromosome:chromosome 12
Location:763246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g492500 (1 of 39) IPR009003 - Peptidase S1, PA clan 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCATTATAGCACCCTAGTACCCCTAAAGATAGAGCATCAGGGAAATCA
Internal bar code:CCAGCACACTTAAGCAACTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2442
LEAP-Seq percent confirming:85.1064
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCTAGGTCATTCGCCAT
Suggested primer 2:CTCATACCCACACACCGCAT