Insertion junction: CLIP2.058872_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058872
Chromosome:chromosome 7
Location:6042171
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800867 (1 of 3) PF09011 - HMG-box domain (HMG_box_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCAATCACTGCGCCACAGTGCCTTGCCATGTCCAACACCACGCCAGC
Internal bar code:TCGTGGGGCGCTAAAGCTTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4306
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTACATGCTGTGGGTGA
Suggested primer 2:GCAAGACCTACAAGCCCCAT