Insertion junction: CLIP2.058873_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058873
Chromosome:chromosome 7
Location:3598371
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336850 (1 of 3) PF01661 - Macro domain (Macro) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGCCAACTGATGCCAGCACGTCCGAAGCACCATGAGCAAGGCCGCGAG
Internal bar code:AACACGTAGACGCAGGCTGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:675
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTTACGGGTTCCAGTGGCTC
Suggested primer 2:CCTCTGCAATACGTGGGGTT