Insertion junction: CLIP2.058873_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058873
Chromosome:chromosome 7
Location:3598372
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336850 (1 of 3) PF01661 - Macro domain (Macro) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCCTAGATGCCAGCCTGGGCACGGGTGATTAGTTGGCACTTGGTAACC
Internal bar code:AACACGTAGACGCAGGCTGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3032
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTGCAATACGTGGGGTT
Suggested primer 2:TTTACGGGTTCCAGTGGCTC