Insertion junction: CLIP2.058880_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.058880
Chromosome:chromosome 12
Location:6544880
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g538150 (1 of 1) K05019 - chloride channel, nucleotide-sensitive, 1A (CLNS1A) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTGTGCTCTCGTGCTGGAAAGACGGTGGCGGGGGCATGCCACCGGTTG
Internal bar code:TTGATGTCAGTGCTTTAGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:181
LEAP-Seq percent confirming:23.5294
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGAGGACACAAGTTGAGA
Suggested primer 2:GCACAGCAGTTATGACGCAG