Insertion junction: CLIP2.058882_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058882
Chromosome:chromosome 15
Location:1436007
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g641650 HLM22 (1 of 4) PTHR10887:SF331 - HELICASE MOV10L1-RELATED; Histone-lysine N-methyltransferase 3'UTR
lncRNA_TCONS_00236652 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGTCATCTAGGTCCGGGGCACATTCCGGCACATCGCAACCACCAACCT
Internal bar code:GCTTAGGACTTATAAGGTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:108
LEAP-Seq percent confirming:1.72414
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:57
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTGGTTACGGATCCAAC
Suggested primer 2:AGCAACTCGGAGCTTTCGAA