Insertion junction: CLIP2.058888_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058888
Chromosome:chromosome 16
Location:3202563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g665550 (1 of 1) PTHR15492//PTHR15492:SF1 - FAMILY NOT NAMED // CYCLIN-D1-BINDING PROTEIN 1 3'UTR
Cre16.g665600 CSK7 (1 of 3) K03097 - casein kinase II subunit alpha (CSNK2A); Casein kinase II-related Ser/Thr kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCAGTAACTGAGTTGGCTAGTTGGTCTCTGGAAATGCAAGTACTCGCA
Internal bar code:GATGAACCCTTAACTTATATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4062
LEAP-Seq percent confirming:93.6508
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:TACGAAACCCCAAGTGCCTC
Suggested primer 2:CAACCACCCCTACTTCGACC