Insertion junction: CLIP2.058889_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058889
Chromosome:chromosome 2
Location:1970363
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g088050 RPP30,XRP30 Ribonuclease MRP subunit P30; (1 of 1) K03539 - ribonuclease P/MRP protein subunit RPP1 (RPP1, RPP30) 5'UTR
Cre02.g088100 (1 of 173) IPR029058 - Alpha/Beta hydrolase fold 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTACTGGCGGCGGCTAGCAACACATGCAAACTATTGCGGCAAACCCGG
Internal bar code:TGTGTTCAGTAGGAGCTACTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1599
LEAP-Seq percent confirming:88.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCCCACTCAGTCTCATC
Suggested primer 2:GACACCAACGAACACACGTG