Insertion junction: CLIP2.058902_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058902
Chromosome:chromosome 16
Location:7509259
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682251 (1 of 1) PF13414//PF14737 - TPR repeat (TPR_11) // Domain of unknown function (DUF4470) (DUF4470) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTACTCAAACGCCGCACACAGCCCAAAGTATCGCTTCAGCCACATCACC
Internal bar code:TAGCGCAACGCCCCAGTGCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1271
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTGCTTCTGCTAATGG
Suggested primer 2:TACCGTTATGGCATGGGCAG