Insertion junction: CLIP2.058912_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058912
Chromosome:chromosome 11
Location:2405402
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095124 (1 of 110) 3.4.19.12 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase 3'UTR
Cre02.g095125 (1 of 1) IPR000104//IPR000408//IPR009091 - Antifreeze protein, type I // Regulator of chromosome condensation, RCC1 // Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCCGCAAAAAGCCTGGAACCCCCCCTCGGGCGATCGACGAACGACCTG
Internal bar code:GATCAAGGCAACGAAGCATCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1789
LEAP-Seq percent confirming:76.5957
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCACCACACCTTACTGT
Suggested primer 2:TACACACACGCAACCCTACC