Insertion junction: CLIP2.058950_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058950
Chromosome:chromosome 7
Location:987429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319320 ACD2 1-aminocyclopropane-1-carboxylate deaminase; (1 of 1) PTHR10314//PTHR10314:SF79 - SER/THR DEHYDRATASE, TRP SYNTHASE // DOF-TYPE TRANSCRIPTION FACTOR TMO6 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAGCTTATCCCTTACTCCTTGTCAGCCTAGACACCACCCCCTTCGCAG
Internal bar code:GAGATATGAATCAAGATTGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2421
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGCTTTGGTCCTGCTTTG
Suggested primer 2:TTGACATTGACGGACTGGGG