Insertion junction: CLIP2.058958_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058958
Chromosome:chromosome 9
Location:4787198
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402441 3'UTR
Cre09.g402478 (1 of 107) PF00069//PF07714 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCTGTGCCGCTGTGGCAATGCGTCTAAGCAGCCATGAGGAGTGATGC
Internal bar code:TTGTGAGGAGTGTGGGTCTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:707
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGTGTGAGAGGAAGGCC
Suggested primer 2:CCGTGAGCTTCATTAGGCCA