Insertion junction: CLIP2.058966_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.058966
Chromosome:chromosome 12
Location:3465705
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g497350 PPR13 PentatricoPeptide Repeat protein 13 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTTGGTGCGTTGTTCTGTCCTTTGCTTGCCTGTCGTATGTTGTGCGTT
Internal bar code:GCGACAAGGGCGTATGATAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:712
LEAP-Seq percent confirming:93.9394
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGTCGGCAGTCAATCAGG
Suggested primer 2:AATGGCTCTCCCTCCTTTGC