Insertion junction: CLIP2.058974_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058974
Chromosome:chromosome 2
Location:4116075
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g103550 EIF1A Eukaryotic translation initiation factor 1A, eIF-1A; (1 of 1) K03236 - translation initiation factor 1A (EIF1A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAGTGCAAATTACTGGAGTGGCTCCGTGCTCCCTCGCTGCGCGTCTAC
Internal bar code:ATTTAGGGTTACTTACCCTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:611
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACTAGGCAACCCTGAACACG
Suggested primer 2:CGAGTCCGATACTGACCGTG