Insertion junction: CLIP2.059001_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059001
Chromosome:chromosome 3
Location:2062754
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g156100 (1 of 1) K11984 - U4/U6.U5 tri-snRNP-associated protein 1 (SART1, HAF, SNU66) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGATTATTAGGGGGGATTGTAGGTACCAGCCCAGACTAAACCGAACCC
Internal bar code:GCACGATCAATTTTTGATAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:565
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCATGTCTCGACCTCCAC
Suggested primer 2:CTCCCCCTACTTGTTGCCTG