Insertion junction: CLIP2.059007_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059007
Chromosome:chromosome 17
Location:5613807
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739900 (1 of 1) IPR012337//IPR027417 - Ribonuclease H-like domain // P-loop containing nucleoside triphosphate hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGTTGCAGCGAGGCGGTCCCGTAATTGGGTTTTGTGGCTCCTGGCTTG
Internal bar code:CGTAATCTAGAGGCAACCAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3613
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTACCGCATCCATCCATC
Suggested primer 2:TTCCTCCATCTGCTGCCTTG