Insertion junction: CLIP2.059011_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059011
Chromosome:chromosome 2
Location:1549684
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAAGGGTGGTCCGTGCCATGGATGCAGAGGTGTGCTAAAGTGTCTGCT
Internal bar code:ACACATACACGATTGTCTCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2413
LEAP-Seq percent confirming:65.0794
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGGAGTGGGGATTTGAG
Suggested primer 2:CTGATGGCATCGACTCTCCC