Insertion junction: CLIP2.059036_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059036
Chromosome:chromosome 3
Location:6890224
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g198000 PPP15 (1 of 2) PF00481//PF13672 - Protein phosphatase 2C (PP2C) // Protein phosphatase 2C (PP2C_2); Phosphoprotein phosphatase 2C-related outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTCGCGCTGCAAGGTGTGGAAACCGTCCACGCCCGCAGGCTTGATCGT
Internal bar code:AAAGGGTCCATTTTCTTAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1137
LEAP-Seq percent confirming:88.5714
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTGTTCAGGTGCGTTTGG
Suggested primer 2:TAAGGTGAACGTGGTGCCTC