Insertion junction: CLIP2.059041_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059041
Chromosome:chromosome 10
Location:92580
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g418150 FAP178 (1 of 1) IPR001715//IPR010441 - Calponin homology domain // CH-like domain in sperm protein; Flagellar Associated Protein 178 3'UTR
Cre10.g418200 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGAGTTTGCAGTTTAGTAATAAAGTGAGCGTGTGTGCCTTGACGTGT
Internal bar code:ACCGAAGACAATCAGGTGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1599
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:105
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:TAGACGATGGTGGCGTATGC
Suggested primer 2:TGTGACCTAGACGAGAGGGG