Insertion junction: CLIP2.059041_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059041
Chromosome:chromosome 10
Location:92628
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g418150 FAP178 (1 of 1) IPR001715//IPR010441 - Calponin homology domain // CH-like domain in sperm protein; Flagellar Associated Protein 178 3'UTR
Cre10.g418200 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAGCGAATTGCCGAAGAGCGCAGACTCTTGCCAGCCTTTTAGCTTTCA
Internal bar code:TTAGTAACTCGTGATTATCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:766
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGACCTAGACGAGAGGGG
Suggested primer 2:TAGACGATGGTGGCGTATGC