Insertion junction: CLIP2.059043_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059043
Chromosome:chromosome 16
Location:5221782
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g684500 TNP43,CSB62 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon); {"Probable transposon-derived protein of Chlamydomonas-Specific family B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGACCTGCTACAACTGCGGGTGTCAGGAGATGGCCATCAAGCGGCTT
Internal bar code:AAAGGTTGCCTCGTATCATCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2444
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCAGGAAAAGGGCTGATC
Suggested primer 2:GCAGCTGGATGAGGAGTTGT